Tools
| Prokka | Annotate your bacterial draft genome in 5 minutes. |
| Nesoni | Swiss army knife for NGS SNP calling / RNA-Seq DGE / read cleaning. |
| VelvetOptimiser | Automatically optimise Velvet assembler parameters. |
| AFree | Fast ALL versus ALL proteome comparisons. |
| Plasmodium Autocount | Count red blood cells infected with Plasmodium. |
| Gene Spaghetti | Visualize nucleotide and amino acid usage in a genome. |
| EST-PAC | A simple EST management tool and annotation pipeline. |
Web Services
| Velvet Advisor | Help choose a k-mer value for Velvet de novo assembly |
| Intron Site Finder | Identify Group II intron sites for prokarytic targeted gene knockout |
| PoPS | A tool for modeling protease activity. |
| Wasabi | Online tool for curation of bacterial genome annotations (restricted access) |
| REFOLD | A database for protein renaturation. |
| PFD | Protein Folding Database. |
| CLIMS | Crystallography Laboratory Information Management System |